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    BGLU6 beta glucosidase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 3767579, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BGLU6
    Official Full Name
    beta glucosidase 6
    Primary source
    TAIR:AT1G60270
    Locus tag
    AT1G60270
    See related
    Araport:AT1G60270
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    beta glucosidase 6; T13D8.16; T13D8_16
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    Genomic context

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    See BGLU6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (22221575..22224358, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene B-box zinc finger family protein Neighboring gene beta glucosidase 5 Neighboring gene NAC domain containing protein 23 Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6. Ishihara H, et al. J Exp Bot, 2016 Mar. PMID 26717955, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. an accession-specific gene, BGLU6 that causes a qualitative difference in flavonol glycoside accumulation in A. thaliana strains, was identified.
      Title: Natural variation in flavonol accumulation in Arabidopsis is determined by the flavonol glucosyltransferase BGLU6.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables beta-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    beta glucosidase 6
    NP_176233.2
    • beta glucosidase 6 (BGLU6); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 4 (TAIR:AT1G60090.1).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      22221575..22224358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104717.3 → NP_176233.2  beta glucosidase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176233.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80750, Q682B4
      UniProtKB/TrEMBL
      A0A178WBJ2
      Conserved Domains (1) summary
      cl23725
      Location:1 → 379
      Glyco_hydro_1; Glycosyl hydrolase family 1

    2. NM_001333891.1 → NP_001322949.1  beta glucosidase 6 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AVJ5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q682B4.1

    Gene LinkOut

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