CSY3 citrate synthase 3 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Official Symbol: CSY3
Official Full Name: citrate synthase 3
Primary source: TAIR:AT2G42790
Locus tag: AT2G42790
See related: Araport:AT2G42790
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: citrate synthase 3; F7D19.21; F7D19_21
Summary: Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.
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Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Go to nucleotide: Graphics FASTA GenBank

Reduced peroxisomal citrate synthase activity in a peroxisomal polyhydroxyalkanoate (PHA)-producing Arabidopsis line increases PHA accumulation
Title: Reduced peroxisomal citrate synthase activity increases substrate availability for polyhydroxyalkanoate biosynthesis in plant peroxisomes.

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

NM_129840.5

Function	Evidence Code	Pubs
enables citrate (Si)-synthase activity	IGI Inferred from Genetic Interaction more info	PubMed

Process	Evidence Code	Pubs
acts_upstream_of_or_within fatty acid beta-oxidation	IGI Inferred from Genetic Interaction more info	PubMed
involved_in tricarboxylic acid cycle	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytosol	HDA more info	PubMed
NOT located_in cytosol	RCA inferred from Reviewed Computational Analysis more info	PubMed
located_in mitochondrion	ISM Inferred from Sequence Model more info
located_in peroxisome	HDA more info	PubMed
located_in peroxisome	IDA Inferred from Direct Assay more info	PubMed

NP_181807.1

citrate synthase 3 (CSY3); FUNCTIONS IN: citrate (SI)-synthase activity; INVOLVED IN: fatty acid beta-oxidation, tricarboxylic acid cycle; LOCATED IN: peroxisome; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Citrate synthase-like, large alpha subdomain (InterPro:IPR016142), Citrate synthase, type II (InterPro:IPR010953), Citrate synthase-like (InterPro:IPR002020), Citrate synthase-like, core (InterPro:IPR016141), Citrate synthase active site (InterPro:IPR019810); BEST Arabidopsis thaliana protein match is: citrate synthase 2 (TAIR:AT3G58750.1); Has 13520 Blast hits to 13518 proteins in 3201 species: Archae - 174; Bacteria - 8544; Metazoa - 357; Fungi - 325; Plants - 176; Viruses - 0; Other Eukaryotes - 3944 (source: NCBI BLink).