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    NAP12 non-intrinsic ABC protein 12 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818275, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NAP12
    Official Full Name
    non-intrinsic ABC protein 12
    Primary source
    TAIR:AT2G37010
    Locus tag
    AT2G37010
    See related
    Araport:AT2G37010
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATNAP12; non-intrinsic ABC protein 12; T1J8.19; T1J8_19
    Summary
    member of NAP subfamily
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    Genomic context

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    See NAP12 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Sequence:
    Chromosome: 2; NC_003071.7 (15541389..15546285)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene RNApolymerase sigma-subunit F Neighboring gene TCP family transcription factor Neighboring gene Translin family protein Neighboring gene TRF-like 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis thaliana ABC protein superfamily, a complete inventory. Sánchez-Fernández R, et al. J Biol Chem, 2001 Aug 10. PMID 11346655
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001336618.1
    NM_129257.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    non-intrinsic ABC protein 12
    NP_181238.4
    • non-intrinsic ABC protein 12 (NAP12); FUNCTIONS IN: transporter activity; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC transporter family protein (TAIR:AT5G60740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15541389..15546285
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129257.4 → NP_181238.4  non-intrinsic ABC protein 12 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181238.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IPY4, Q9SJK6
      UniProtKB/TrEMBL
      A0A178VZC4
      Conserved Domains (3) summary
      cd03213
      Location:482 → 708
      ABCG_EPDR; Eye pigment and drug resistance transporter subfamily G of the ATP-binding cassette superfamily
      TIGR00955
      Location:498 → 1076
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
      pfam15719
      Location:303 → 416
      DUF4674; Domain of unknown function (DUF4674)

    2. NM_001336618.1 → NP_001323430.1  non-intrinsic ABC protein 12 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IPY4, Q9SJK6
      UniProtKB/TrEMBL
      A0A178VZC4
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJK6.3

    Gene LinkOut

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