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    ATCSLC08 Glycosyl transferase family 2 protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816999, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATCSLC08
    Official Full Name
    Glycosyl transferase family 2 protein
    Primary source
    TAIR:AT2G24630
    Locus tag
    AT2G24630
    See related
    Araport:AT2G24630
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLC8; CELLULOSE-SYNTHASE LIKE C8; CSLC08; F25P17.7; F25P17_7
    Summary
    encodes a gene similar to cellulose synthase
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    Genomic context

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    See ATCSLC08 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (10471196..10474610, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene S-locus glycoprotein family protein Neighboring gene Defensin-like (DEFL) family protein Neighboring gene ubiquitin-specific protease 19 Neighboring gene Transcriptional factor B3 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The synthesis of xyloglucan, an abundant plant cell wall polysaccharide, requires CSLC function. Kim SJ, et al. Proc Natl Acad Sci U S A, 2020 Aug 18. PMID 32737163, Free PMC Article
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001335941.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein homodimerization activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell wall organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in plant organ development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen tube development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in Golgi apparatus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    Glycosyl transferase family 2 protein
    NP_001318283.1
    • ATCSLC08; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5319 Blast hits to 5316 proteins in 1532 species: Archae - 206; Bacteria - 4134; Metazoa - 30; Fungi - 95; Plants - 510; Viruses - 14; Other Eukaryotes - 330 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10471196..10474610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128024.3 → NP_180039.1  Glycosyl transferase family 2 protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180039.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WN05, Q9SJA2
      UniProtKB/TrEMBL
      A0A178VVK0, A0A654EXE4, A0A7G2EC83, W8Q3F7
      Conserved Domains (1) summary
      cl11394
      Location:227 → 463
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    2. NM_001335941.1 → NP_001318283.1  Glycosyl transferase family 2 protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WN05, Q9SJA2
      UniProtKB/TrEMBL
      A0A178VVK0, A0A654EXE4, A0A7G2EC83, W8Q3F7
      Conserved Domains (1) summary
      cl11394
      Location:227 → 463
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJA2.1

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