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    LEA dehydrin LEA [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816688, updated on 18-Sep-2024

    Summary

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    Official Symbol
    LEA
    Official Full Name
    dehydrin LEA
    Primary source
    TAIR:AT2G21490
    Locus tag
    AT2G21490
    See related
    Araport:AT2G21490
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    dehydrin LEA; F3K23.25; F3K23_25
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    Genomic context

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    See LEA in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (9205990..9207125, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SUMO-activating enzyme 2 Neighboring gene Malectin/receptor-like protein kinase family protein Neighboring gene RING/U-box superfamily protein Neighboring gene DNAJ heat shock N-terminal domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ubiquitous distribution of late embryogenesis abundant proteins across cell compartments in Arabidopsis offers tailored protection against abiotic stress. Candat A, et al. Plant Cell, 2014 Jul. PMID 25005920, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_127721.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    dehydrin LEA
    NP_179744.1
    • dehydrin LEA (LEA); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to water, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Dehydrin (InterPro:IPR000167); BEST Arabidopsis thaliana protein match is: Dehydrin family protein (TAIR:AT4G39130.1); Has 1372 Blast hits to 1173 proteins in 160 species: Archae - 0; Bacteria - 7; Metazoa - 17; Fungi - 21; Plants - 1314; Viruses - 2; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9205990..9207125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127721.4 → NP_179744.1  dehydrin LEA [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179744.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q42254, Q8L9Q5, Q96261
      UniProtKB/TrEMBL
      A0A178VQ66, A0A5S9X028
      Conserved Domains (1) summary
      pfam00257
      Location:25 → 180
      Dehydrin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96261.1

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