Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: Sec14p-like phosphatidylinositol transfer family protein
Primary source: TAIR:AT2G21520
Locus tag: AT2G21520
See related: Araport:AT2G21520
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: F3K23.28; F3K23_28
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 11

Sequence:: Chromosome: 2; NC_003071.7 (9215519..9219236)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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NM_001124884.3

Supported by ESTs:

NM_001335760.1

Supported by ESTs:

NM_127724.7

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in Golgi apparatus	ISM Inferred from Sequence Model more info
located_in mitochondrion	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: Sec14p-like phosphatidylinositol transfer family protein

NP_001118356.1

Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_179747.4

Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G39170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

9215519..9219236

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_127724.7 → NP_179747.4 Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_179747.4

Status: REVIEWED

UniProtKB/Swiss-Prot

F4IHJ0, Q67YM1, Q9SJS7

UniProtKB/TrEMBL

A0A178VVE9

Conserved Domains (2) summary

smart01100
Location:86 → 132

CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

cd00170
Location:150 → 320

SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
NM_001124884.3 → NP_001118356.1 Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001118356.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VVF3, B3H588

Conserved Domains (2) summary

smart01100
Location:90 → 136

CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

cd00170
Location:154 → 324

SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
NM_001335760.1 → NP_001323547.1 Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178VVF3, B3H588

Conserved Domains (2) summary

smart01100
Location:90 → 136

CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

cd00170
Location:154 → 324

SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...