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    ER lumen protein retaining receptor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843909, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ER lumen protein retaining receptor family protein
    Primary source
    TAIR:AT1G75760
    Locus tag
    AT1G75760
    See related
    Araport:AT1G75760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10A5.5; F10A5_5
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (28446632..28448735, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene tRNA-Thr Neighboring gene GAST1 protein homolog 1 Neighboring gene uncharacterized protein Neighboring gene protein TUB21 Neighboring gene tubulin beta-1 chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001334696.1
    NM_001334697.1
    NM_106226.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ER retention sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein retention in ER lumen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    ER lumen protein retaining receptor family protein
    NP_177704.1
    • ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT1G19970.1); Has 891 Blast hits to 891 proteins in 228 species: Archae - 0; Bacteria - 0; Metazoa - 315; Fungi - 179; Plants - 231; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28446632..28448735 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106226.4 → NP_177704.1  ER lumen protein retaining receptor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177704.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WBU7, A0A654EPJ4, Q84TL5
      Conserved Domains (1) summary
      pfam00810
      Location:72 → 215
      ER_lumen_recept; ER lumen protein retaining receptor

    2. NM_001334696.1 → NP_001320674.1  ER lumen protein retaining receptor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANJ6, A0A654EPJ4

    3. NM_001334697.1 → NP_001320673.1  ER lumen protein retaining receptor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANJ0
    Nucleotide Protein
    Heading Accession and Version

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