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    Galactosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843819, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactosyltransferase family protein
    Primary source
    TAIR:AT1G74800
    Locus tag
    AT1G74800
    See related
    Araport:AT1G74800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F25A4.23; F25A4_23
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (28101762..28105193, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene zinc ion binding protein Neighboring gene Nodulin-like / Major Facilitator Superfamily protein Neighboring gene catalytics Neighboring gene HCO3- transporter family Neighboring gene RmlC-like cupins superfamily protein Neighboring gene myosin-binding protein, putative (Protein of unknown function, DUF593)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Two Hydroxyproline Galactosyltransferases, GALT5 and GALT2, Function in Arabinogalactan-Protein Glycosylation, Growth and Development in Arabidopsis. Basu D, et al. PLoS One, 2015. PMID 25974423, Free PMC Article
    2. Hydroxyproline-O-Galactosyltransferases Synthesizing Type II Arabinogalactans Are Essential for Male Gametophytic Development in Arabidopsis. Kaur D, et al. Front Plant Sci, 2022. PMID 35774810, Free PMC Article
    3. A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis. Basu D, et al. BMC Plant Biol, 2015 Dec 21. PMID 26690932, Free PMC Article
    4. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Two hydroxyproline galactosyltransferases, GALT5 and GALT2, function in arabinogalactan-protein glycosylation, growth and development in Arabidopsis thaliana. [GALT5]
      Title: Two Hydroxyproline Galactosyltransferases, GALT5 and GALT2, Function in Arabinogalactan-Protein Glycosylation, Growth and Development in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_106138.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables hydroxyproline O-galactosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables hydroxyproline O-galactosyltransferase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arabinogalactan protein metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen wall assembly IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in protein O-linked glycosylation via hydroxyproline IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within root hair cell development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endosome HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

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    Preferred Names
    Galactosyltransferase family protein
    NP_177618.2
    • Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Galectin, carbohydrate recognition domain (InterPro:IPR001079), Glycosyl transferase, family 31 (InterPro:IPR002659), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT5G62620.1); Has 2254 Blast hits to 2220 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 1612; Fungi - 6; Plants - 579; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28101762..28105193 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106138.3 → NP_177618.2  Galactosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177618.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8RX55, Q9SSG4, W8QP19
      UniProtKB/TrEMBL
      A0A5S9WUG0
      Conserved Domains (3) summary
      PLN03133
      Location:35 → 672
      PLN03133; beta-1,3-galactosyltransferase; Provisional
      pfam00337
      Location:192 → 389
      Gal-bind_lectin; Galactoside-binding lectin
      cl21608
      Location:439 → 616
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RX55.1

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