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    BDG1 alpha/beta-Hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842775, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BDG1
    Official Full Name
    alpha/beta-Hydrolases superfamily protein
    Primary source
    TAIR:AT1G64670
    Locus tag
    AT1G64670
    See related
    Araport:AT1G64670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    9-CIS EPOXYCAROTENOID DIOXYGENASE DEFECTIVE 1; BODYGUARD1; CED1; F1N19.24; F1N19_24
    Summary
    Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.
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    Genomic context

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    See BDG1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (24030743..24033674, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene with no lysine (K) kinase 10 Neighboring gene early nodulin-like protein 8 Neighboring gene Major facilitator superfamily protein Neighboring gene methionine gamma-lyase Neighboring gene beta-carotene isomerase D27 Neighboring gene branchless trichome

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BODYGUARD is required for the biosynthesis of cutin in Arabidopsis. Jakobson L, et al. New Phytol, 2016 Jul. PMID 26990896
    2. The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis. Kurdyukov S, et al. Plant Cell, 2006 Feb. PMID 16415209, Free PMC Article
    3. The plant cuticle is required for osmotic stress regulation of abscisic acid biosynthesis and osmotic stress tolerance in Arabidopsis. Wang ZY, et al. Plant Cell, 2011 May. PMID 21610183, Free PMC Article
    4. Root system architecture in Arabidopsis grown in culture is regulated by sucrose uptake in the aerial tissues. Macgregor DR, et al. Plant Cell, 2008 Oct. PMID 18952782, Free PMC Article
    5. Cuticular defects lead to full immunity to a major plant pathogen. Chassot C, et al. Plant J, 2007 Mar. PMID 17257167

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. This study identifies BDG as an important component of the cutin biosynthesis machinery in Arabidopsis. Using BDG, cutin can be greatly modified without altering the cuticular water barrier properties and transpiration.[BDG]
      Title: BODYGUARD is required for the biosynthesis of cutin in Arabidopsis.
    2. Map-based cloning revealed unexpectedly that CED1 encodes a putative alpha/beta hydrolase domain-containing protein and is allelic to the BODYGUARD gene that was recently shown to be essential for cuticle biogenesis.
      Title: The plant cuticle is required for osmotic stress regulation of abscisic acid biosynthesis and osmotic stress tolerance in Arabidopsis.
    3. Bodyguard (BDG) codes for an extracellular synthase responsible for the formation of cuticle.[BDG]
      Title: The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_105142.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cuticle development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cutin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in defense response to fungus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in lateral root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of cutin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of abscisic acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to osmotic stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to osmotic stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in suberin biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transpiration IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha/beta-Hydrolases superfamily protein
    NP_564837.1
    • BODYGUARD1 (BDG1); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G41900.1); Has 7923 Blast hits to 7922 proteins in 1350 species: Archae - 58; Bacteria - 5093; Metazoa - 308; Fungi - 248; Plants - 246; Viruses - 4; Other Eukaryotes - 1966 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24030743..24033674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334171.1 → NP_001323396.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AWW6, A0A5S9WPS6

    2. NM_001334172.1 → NP_001323395.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AX04, A0A5S9WPS6

    3. NM_105142.4 → NP_564837.1  alpha/beta-Hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564837.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFX7, Q9SGU8
      UniProtKB/TrEMBL
      A0A178WKZ6, A0A5S9WPS6
      Conserved Domains (1) summary
      PLN03087
      Location:1 → 462
      PLN03087; BODYGUARD 1 domain containing hydrolase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LFX7.1

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