U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Major facilitator superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842773, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    Major facilitator superfamily protein
    Primary source
    TAIR:AT1G64650
    Locus tag
    AT1G64650
    See related
    Araport:AT1G64650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F1N19.22; F1N19_22
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (24023498..24026530, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene with no lysine (K) kinase 10 Neighboring gene early nodulin-like protein 8 Neighboring gene methionine gamma-lyase Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene beta-carotene isomerase D27

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Label-free protein quantification for plant Golgi protein localization and abundance. Nikolovski N, et al. Plant Physiol, 2014 Oct. PMID 25122472, Free PMC Article
    2. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
    3. A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. Jaquinod M, et al. Mol Cell Proteomics, 2007 Mar. PMID 17151019, Free PMC Article
    4. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_001084303.2
    NM_105140.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molybdate ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in molybdate ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 
    located_in Golgi trans cisterna HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in endosome HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in trans-Golgi network HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Major facilitator superfamily protein
    NP_001077772.1
    • Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 856 Blast hits to 849 proteins in 287 species: Archae - 16; Bacteria - 476; Metazoa - 88; Fungi - 64; Plants - 135; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink).
    NP_176646.1
    • Major facilitator superfamily protein; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF791 (InterPro:IPR008509), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G27720.1); Has 889 Blast hits to 882 proteins in 311 species: Archae - 19; Bacteria - 505; Metazoa - 88; Fungi - 69; Plants - 135; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24023498..24026530 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105140.4 → NP_176646.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176646.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W607, A0A7G2E395, Q0WQ33, Q6NLR2
      Conserved Domains (1) summary
      cd17487
      Location:35 → 431
      MFS_MFSD5_like; Major facilitator superfamily domain containing 5 protein

    2. NM_001084303.2 → NP_001077772.1  Major facilitator superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077772.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E395, A8MR14
      Conserved Domains (2) summary
      pfam07690
      Location:18 → 351
      MFS_1; Major Facilitator Superfamily
      cl21472
      Location:9 → 317
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools