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    Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843991, updated on 18-Sep-2024

    Summary

    Official Full Name
    Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
    Primary source
    TAIR:AT1G76580
    Locus tag
    AT1G76580
    See related
    Araport:AT1G76580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F14G6.18; F14G6_18
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    11
    Sequence:
    Chromosome: 1; NC_003070.9 (28734207..28738967)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene CP12 domain-containing protein 3 Neighboring gene Chlorophyll A-B binding family protein Neighboring gene ncRNA Neighboring gene PLATZ transcription factor family protein

    General gene information

    NM_001334733.1
    NM_001334734.1
    NM_001334735.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding  
    enables DNA-binding transcription factor activity PubMed 
    enables transcription cis-regulatory region binding PubMed 
    Component Evidence Code Pubs
    located_in nucleus  
    located_in nucleus  

    General protein information

    Preferred Names
    Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
    NP_001319389.1
    • Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, SBP-box (InterPro:IPR004333); BEST Arabidopsis thaliana protein match is: squamosa promoter binding protein-like 14 (TAIR:AT1G20980.1); Has 4275 Blast hits to 1172 proteins in 134 species: Archae - 0; Bacteria - 31; Metazoa - 161; Fungi - 128; Plants - 962; Viruses - 0; Other Eukaryotes - 2993 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28734207..28738967
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001334733.1NP_001319389.1  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WED4, A0A2H1ZEF0, A0A384KWK6, A0A5S9WUW7
      Conserved Domains (1) summary
      pfam03110
      Location:114187
      SBP; SBP domain
    2. NM_001334734.1NP_001322693.1  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUS9
    3. NM_001334735.1NP_001322692.1  Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUS5
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