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    protein kinase family protein / C-type lectin domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841661, updated on 18-Sep-2024

    Summary

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    Official Full Name
    protein kinase family protein / C-type lectin domain-containing protein
    Primary source
    TAIR:AT1G52310
    Locus tag
    AT1G52310
    See related
    Araport:AT1G52310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19K6.8; F19K6_8
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (19478066..19481154)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene Zinc-binding ribosomal protein family protein Neighboring gene Regulator of Vps4 activity in the MVB pathway protein Neighboring gene kinesin-like protein Neighboring gene Initiation factor eIF-4 gamma, MA3 Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001333533.1
    NM_104110.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane receptor protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    protein kinase family protein / C-type lectin domain-containing protein
    NP_175641.1
    • protein kinase family protein / C-type lectin domain-containing protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: C-type lectin (InterPro:IPR001304), Protein kinase, catalytic domain (InterPro:IPR000719), C-type lectin fold (InterPro:IPR016187), Tyrosine-protein kinase, active site (InterPro:IPR008266), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), C-type lectin-like (InterPro:IPR016186); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G61860.1); Has 99398 Blast hits to 98054 proteins in 3684 species: Archae - 81; Bacteria - 11858; Metazoa - 37328; Fungi - 6469; Plants - 30414; Viruses - 265; Other Eukaryotes - 12983 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19478066..19481154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104110.3 → NP_175641.1  protein kinase family protein / C-type lectin domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175641.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q56ZM6, Q9C823
      UniProtKB/TrEMBL
      A0A5S9WLL8, A0A654EJG8
      Conserved Domains (2) summary
      smart00034
      Location:50 → 187
      CLECT; C-type lectin (CTL) or carbohydrate-recognition domain (CRD)
      cl21453
      Location:280 → 545
      PKc_like; Protein Kinases, catalytic domain

    2. NM_001333533.1 → NP_001321004.1  protein kinase family protein / C-type lectin domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W233, A0A1P8API8, A0A5S9WLL8
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C823.1

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