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    PIPK11 Phosphatidylinositol-4-phosphate 5-kinase, core [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839469, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PIPK11
    Official Full Name
    Phosphatidylinositol-4-phosphate 5-kinase, core
    Primary source
    TAIR:AT1G01460
    Locus tag
    AT1G01460
    See related
    Araport:AT1G01460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPIPK11; F22L4.2; F22L4_2
    Summary
    Type I phosphatidylinositol-4-phosphate 5-kinase, subfamily A.
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    Genomic context

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    See PIPK11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (168559..171386)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene late embryogenesis abundant hydroxyproline-rich glycoprotein family protein Neighboring gene Late embryogenesis abundant protein Neighboring gene 1-amino-cyclopropane-1-carboxylate synthase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Arabidopsis Phosphatidylinositol Phosphate 5-Kinase PIP5K3 is a key regulator of root hair tip growth. Kusano H, et al. Plant Cell, 2008 Feb. PMID 18281506, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phosphatidylinositol metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within phosphatidylinositol phosphate biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Phosphatidylinositol-4-phosphate 5-kinase, core
    NP_171653.2
    • PIPK11; FUNCTIONS IN: 1-phosphatidylinositol-4-phosphate 5-kinase activity, phosphatidylinositol phosphate kinase activity; INVOLVED IN: phosphatidylinositol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: sperm cell, sepal, male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Phosphatidylinositol-4-phosphate 5-kinase, core, subgroup (InterPro:IPR016034), Phosphatidylinositol-4-phosphate 5-kinase, core (InterPro:IPR002498); BEST Arabidopsis thaliana protein match is: phosphatidylinositol phosphate kinase 10 (TAIR:AT4G01190.1); Has 2109 Blast hits to 1621 proteins in 223 species: Archae - 0; Bacteria - 2; Metazoa - 980; Fungi - 317; Plants - 416; Viruses - 0; Other Eukaryotes - 394 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      168559..171386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100028.3 → NP_171653.2  Phosphatidylinositol-4-phosphate 5-kinase, core [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_171653.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23705, Q9LMN1
      UniProtKB/TrEMBL
      A0A178WDA9, Q08AA6
      Conserved Domains (1) summary
      smart00330
      Location:7 → 419
      PIPKc; Phosphatidylinositol phosphate kinases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LMN1.2

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