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    GAUT13 galacturonosyltransferase 13 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821312, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GAUT13
    Official Full Name
    galacturonosyltransferase 13
    Primary source
    TAIR:AT3G01040
    Locus tag
    AT3G01040
    See related
    Araport:AT3G01040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    galacturonosyltransferase 13; T4P13.28; T4P13_28
    Summary
    Encodes a protein with putative galacturonosyltransferase activity.
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    Genomic context

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    See GAUT13 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    7
    Sequence:
    Chromosome: 3; NC_003074.8 (8723..12697)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ISCU-like 2 Neighboring gene C2H2 and C2HC zinc fingers superfamily protein Neighboring gene membrane-anchored ubiquitin-fold protein 1 precursor Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis galacturonosyltransferase (GAUT) 13 and GAUT14 have redundant functions in pollen tube growth. Wang L, et al. Mol Plant, 2013 Jul. PMID 23709340
    2. Functional identification of an Arabidopsis pectin biosynthetic homogalacturonan galacturonosyltransferase. Sterling JD, et al. Proc Natl Acad Sci U S A, 2006 Mar 28. PMID 16540543, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. GAUT13 and GAUT14 function redundantly in pollen tube growth
      Title: Arabidopsis galacturonosyltransferase (GAUT) 13 and GAUT14 have redundant functions in pollen tube growth.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001125073.2
    NM_001337304.1
    NM_001337305.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell wall pectin biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen tube growth IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in pollen tube IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galacturonosyltransferase 13
    NP_001319436.1
    • galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 1671 Blast hits to 1663 proteins in 335 species: Archae - 0; Bacteria - 670; Metazoa - 145; Fungi - 4; Plants - 816; Viruses - 2; Other Eukaryotes - 34 (source: NCBI BLink).
    NP_001319437.1
    • galacturonosyltransferase 13 (GAUT13); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galacturonosyltransferase 14 (TAIR:AT5G15470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      8723..12697
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337305.1 → NP_001319437.1  galacturonosyltransferase 13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H768, Q0WV13, Q9MAB8
      UniProtKB/TrEMBL
      A0A178V7X2, A0A384LCY9, W8Q6V8
      Conserved Domains (1) summary
      PLN02870
      Location:1 → 532
      PLN02870; Probable galacturonosyltransferase

    2. NM_001125073.2 → NP_001118545.1  galacturonosyltransferase 13 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118545.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H768, Q0WV13, Q9MAB8
      UniProtKB/TrEMBL
      A0A178V7X2, A0A384LCY9, W8Q6V8
      Conserved Domains (1) summary
      PLN02870
      Location:1 → 532
      PLN02870; Probable galacturonosyltransferase

    3. NM_001337304.1 → NP_001319436.1  galacturonosyltransferase 13 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H768, Q0WV13, Q9MAB8
      UniProtKB/TrEMBL
      A0A2H1ZEG1
    Nucleotide Protein
    Heading Accession and Version

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