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    ELMO/CED-12 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821208, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ELMO/CED-12 family protein
    Primary source
    TAIR:AT3G03610
    Locus tag
    AT3G03610
    See related
    Araport:AT3G03610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12J13.11; T12J13_11
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    11
    Sequence:
    Chromosome: 3; NC_003074.8 (868741..871837)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SWIB/MDM2 domain superfamily protein Neighboring gene ribosomal protein S2 Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene MATE efflux family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337475.1
    NM_001337476.1
    NM_001337477.1
    NM_111232.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ELMO/CED-12 family protein
    NP_566211.1
    • ELMO/CED-12 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: phagocytosis; LOCATED IN: cytoskeleton; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Engulfment/cell motility, ELMO (InterPro:IPR006816); BEST Arabidopsis thaliana protein match is: ELMO/CED-12 family protein (TAIR:AT1G03620.1); Has 825 Blast hits to 825 proteins in 140 species: Archae - 0; Bacteria - 0; Metazoa - 481; Fungi - 44; Plants - 173; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      868741..871837
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111232.4 → NP_566211.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566211.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VD36, A0A384KGV6, Q8LC36, Q8VXW7
      Conserved Domains (1) summary
      pfam04727
      Location:127 → 293
      ELMO_CED12; ELMO/CED-12 family

    2. NM_001337475.1 → NP_001326123.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VD36, A0A384KGV6, Q8LC36, Q8VXW7
      Conserved Domains (1) summary
      pfam04727
      Location:127 → 293
      ELMO_CED12; ELMO/CED-12 family

    3. NM_001337476.1 → NP_001326124.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VD36, A0A384KGV6, Q8LC36, Q8VXW7
      Conserved Domains (1) summary
      pfam04727
      Location:127 → 293
      ELMO_CED12; ELMO/CED-12 family

    4. NM_001337477.1 → NP_001326125.1  ELMO/CED-12 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LNB6, A0A5S9X8S3
    Nucleotide Protein
    Heading Accession and Version

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