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    EMB2804 tubulin folding cofactor B [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820184, updated on 18-Sep-2024

    Summary

    Official Symbol
    EMB2804
    Official Full Name
    tubulin folding cofactor B
    Primary source
    TAIR:AT3G10220
    Locus tag
    AT3G10220
    See related
    Araport:AT3G10220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMBRYO DEFECTIVE 2804
    Summary
    Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.
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    Genomic context

    See EMB2804 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (3161706..3164231)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Putative membrane lipoprotein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein Neighboring gene ncRNA Neighboring gene lycopene cyclase Neighboring gene ncRNA Neighboring gene F-box and associated interaction domains-containing protein

    General protein information

    Preferred Names
    tubulin folding cofactor B
    NP_187633.2
    • tubulin folding cofactor B; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: tubulin complex assembly, embryo development, cell division; LOCATED IN: nucleus, cytoplasm, phragmoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 1750 Blast hits to 1417 proteins in 212 species: Archae - 0; Bacteria - 0; Metazoa - 1247; Fungi - 285; Plants - 70; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3161706..3164231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111857.5NP_187633.2  tubulin folding cofactor B [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187633.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q67XW4, Q67Z52, Q8L5R5, Q9SS34
      UniProtKB/TrEMBL
      A0A178VKX4, A0A5S9XB09, A0A654F5P2
      Conserved Domains (2) summary
      smart01052
      Location:161228
      CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
      pfam14560
      Location:1496
      Ubiquitin_2; Ubiquitin-like domain