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    aluminum induced protein with YGL and LRDR motifs [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820784, updated on 18-Sep-2024

    Summary

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    Official Full Name
    aluminum induced protein with YGL and LRDR motifs
    Primary source
    TAIR:AT3G15450
    Locus tag
    AT3G15450
    See related
    Araport:AT3G15450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (5212984..5214124)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Regulator of chromosome condensation (RCC1) family protein Neighboring gene RING/U-box protein Neighboring gene Ribosomal RNA processing Brix domain protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene fiber (DUF1218)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001035624.3
    NM_001035625.2
    NM_112413.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    aluminum induced protein with YGL and LRDR motifs
    NP_001030701.1
    • Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT4G27450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001030702.1
    • Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT4G27450.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_566513.1
    • Aluminium induced protein with YGL and LRDR motifs; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Aluminium induced protein with YGL and LRDR motifs (TAIR:AT4G27450.1); Has 430 Blast hits to 430 proteins in 86 species: Archae - 0; Bacteria - 40; Metazoa - 2; Fungi - 2; Plants - 364; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5212984..5214124
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001035624.3 → NP_001030701.1  aluminum induced protein with YGL and LRDR motifs [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030701.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DG40
      Conserved Domains (1) summary
      cl00319
      Location:2 → 200
      Gn_AT_II; Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to ...

    2. NM_112413.4 → NP_566513.1  aluminum induced protein with YGL and LRDR motifs [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566513.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGV6, A0A384KZU0, Q9LE80
      Conserved Domains (1) summary
      pfam12481
      Location:2 → 229
      DUF3700; Aluminium induced protein

    3. NM_001035625.2 → NP_001030702.1  aluminum induced protein with YGL and LRDR motifs [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030702.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4IYS4
      Conserved Domains (1) summary
      cl00319
      Location:2 → 168
      Gn_AT_II; Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to ...
    Nucleotide Protein
    Heading Accession and Version

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