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    Sucrase/ferredoxin-like family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822379, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Sucrase/ferredoxin-like family protein
    Primary source
    TAIR:AT3G27570
    Locus tag
    AT3G27570
    See related
    Araport:AT3G27570
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    6
    Sequence:
    Chromosome: 3; NC_003074.8 (10213996..10216964, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene tRNA-Asp Neighboring gene Protein kinase superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene reverse transcriptase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_113673.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    Sucrase/ferredoxin-like family protein
    NP_566821.2
    • Sucrase/ferredoxin-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT5G40510.1); Has 487 Blast hits to 487 proteins in 162 species: Archae - 6; Bacteria - 90; Metazoa - 0; Fungi - 283; Plants - 71; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      10213996..10216964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001338893.1 → NP_001327128.1  Sucrase/ferredoxin-like family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XGN4, A0A654FCM5, A0A7G2ENX2, Q93Z74
      Conserved Domains (1) summary
      pfam06999
      Location:32 → 237
      Suc_Fer-like; Sucrase/ferredoxin-like

    2. NM_113673.4 → NP_566821.2  Sucrase/ferredoxin-like family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566821.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VAL2, F4IWK4
      Conserved Domains (1) summary
      pfam06999
      Location:71 → 270
      Suc_Fer-like; Sucrase/ferredoxin-like
    Nucleotide Protein
    Heading Accession and Version

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