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    GRP5 glycine-rich protein 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 3768804, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GRP5
    Official Full Name
    glycine-rich protein 5
    Primary source
    TAIR:AT3G20470
    Locus tag
    AT3G20470
    See related
    Araport:AT3G20470
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATGRP-5; ATGRP5; glycine-rich protein 5; GLYCINE-RICH PROTEIN 5; GRP-5
    Summary
    encodes a glycine-rich protein that is expressed more abundantly in immature seed pods than in stems and leaves. Expression is not detected in roots or flowers.
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    Genomic context

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    See GRP5 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (7140294..7141353, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene B-cell receptor-associated protein 31-like protein Neighboring gene Major facilitator superfamily protein Neighboring gene MUTS-homologue 5 Neighboring gene tetraacyldisaccharide 4'-kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tissue expression pattern of the AtGRP5 regulatory region is controlled by a combination of positive and negative elements. Mangeon A, et al. Plant Cell Rep, 2010 May. PMID 20195610
    2. AtGRP5, a vacuole-located glycine-rich protein involved in cell elongation. Mangeon A, et al. Planta, 2009 Jul. PMID 19434422
    3. Glycine-rich proteins as structural components of plant cell walls. Ringli C, et al. Cell Mol Life Sci, 2001 Sep. PMID 11693524, Free PMC Article
    4. Expression of glycine-rich protein genes, AtGRP5 and AtGRP23, induced by the cutin monomer 16-hydroxypalmitic acid in Arabidopsis thaliana. Park JH, et al. Plant Physiol Biochem, 2008 Nov. PMID 18657431
    5. Differential expression of five Arabidopsis genes encoding glycine-rich proteins. de Oliveira DE, et al. Plant Cell, 1990 May. PMID 2152168, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtGRP5 is expressed during zygotic embryogenesis. Multiple negative and positive regulatory elements are present in the AtGRP5 promoter and operate in order to confer its distinct expression pattern.
      Title: The tissue expression pattern of the AtGRP5 regulatory region is controlled by a combination of positive and negative elements.
    2. The results suggest that this vacuolar GRP could be involved in organ growth by promoting cell elongation processes.
      Title: AtGRP5, a vacuole-located glycine-rich protein involved in cell elongation.
    3. results suggest the possible role of some species of glycine-rich proteins, such as AtGRP5 and AtGRP23, in response to the pathogenic invasion mediated by cutin monomers in plants
      Title: Expression of glycine-rich protein genes, AtGRP5 and AtGRP23, induced by the cutin monomer 16-hydroxypalmitic acid in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_112938.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables structural constituent of cell wall TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of cell growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in positive regulation of organ growth IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to flooding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salicylic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plant-type cell wall TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in plant-type vacuole IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycine-rich protein 5
    NP_188682.1
    • glycine-rich protein 5 (GRP5); Has 299218 Blast hits to 51775 proteins in 2622 species: Archae - 740; Bacteria - 86710; Metazoa - 106696; Fungi - 19777; Plants - 26257; Viruses - 3929; Other Eukaryotes - 55109 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      7140294..7141353 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112938.4 → NP_188682.1  glycine-rich protein 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188682.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q41191, Q9LTP5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LTP5.1

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