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    P-loop containing nucleoside triphosphate hydrolases superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 840224, updated on 18-Sep-2024

    Summary

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    Official Full Name
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    Primary source
    TAIR:AT1G33290
    Locus tag
    AT1G33290
    See related
    Araport:AT1G33290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16O9.17; T16O9_17
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (12074099..12076289)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Transmembrane proteins 14C Neighboring gene Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein Neighboring gene NAC domain containing protein 15 Neighboring gene pseudo Neighboring gene Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001333033.1
    NM_103058.4
    NM_179413.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    P-loop containing nucleoside triphosphate hydrolases superfamily protein
    NP_174599.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G10420.2); Has 1039 Blast hits to 1033 proteins in 441 species: Archae - 8; Bacteria - 771; Metazoa - 34; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).
    NP_849744.1
    • P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1); Has 745 Blast hits to 453 proteins in 163 species: Archae - 0; Bacteria - 369; Metazoa - 12; Fungi - 0; Plants - 203; Viruses - 0; Other Eukaryotes - 161 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      12074099..12076289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_103058.4 → NP_174599.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_174599.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WK66, B9DG96, Q9C877
      Conserved Domains (1) summary
      cl40481
      Location:44 → 332
      YlqF_related_GTPase; Circularly permuted YlqF-related GTPases

    2. NM_179413.1 → NP_849744.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849744.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q0WPP7
      Conserved Domains (2) summary
      smart00382
      Location:164 → 239
      AAA; ATPases associated with a variety of cellular activities
      cl21455
      Location:44 → 256
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    3. NM_001333033.1 → NP_001321305.1  P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQI6, B9DG96
    Nucleotide Protein
    Heading Accession and Version

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