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    NmrA-like negative transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843867, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NmrA-like negative transcriptional regulator family protein
    Primary source
    TAIR:AT1G75300
    Locus tag
    AT1G75300
    See related
    Araport:AT1G75300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22H5.16; F22H5_16
    Summary
    encodes a protein whose sequence is similar to an isoflavone reductase
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (28255495..28257040)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene NmrA-like negative transcriptional regulator family protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene ncRNA Neighboring gene auxin-like 1 protein Neighboring gene ornithine carbamoyltransferase Neighboring gene nucleolar-like protein Neighboring gene Zinc finger C-x8-C-x5-C-x3-H type family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_106185.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    NmrA-like negative transcriptional regulator family protein
    NP_177665.1
    • NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: oxidoreductase activity, acting on NADH or NADPH; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1595 Blast hits to 1591 proteins in 336 species: Archae - 8; Bacteria - 421; Metazoa - 0; Fungi - 508; Plants - 551; Viruses - 7; Other Eukaryotes - 100 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28255495..28257040
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106185.2 → NP_177665.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177665.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2E2W9, Q9FRM1
      Conserved Domains (1) summary
      pfam05368
      Location:8 → 254
      NmrA; NmrA-like family
    Nucleotide Protein
    Heading Accession and Version

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