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    Sec14p-like phosphatidylinositol transfer family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843854, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Sec14p-like phosphatidylinositol transfer family protein
    Primary source
    TAIR:AT1G75170
    Locus tag
    AT1G75170
    See related
    Araport:AT1G75170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22H5.20; F22H5_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (28213666..28215887)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Erythronate-4-phosphate dehydrogenase family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036206.2
    NM_001036207.2
    NM_106173.6

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Sec14p-like phosphatidylinositol transfer family protein
    NP_001031283.1
    • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001031284.1
    • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_177653.1
    • Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT4G36640.1); Has 2816 Blast hits to 2808 proteins in 236 species: Archae - 0; Bacteria - 0; Metazoa - 885; Fungi - 732; Plants - 881; Viruses - 0; Other Eukaryotes - 318 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28213666..28215887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106173.6 → NP_177653.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177653.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIZ2, Q9FRK8
      Conserved Domains (2) summary
      smart01100
      Location:21 → 68
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      cd00170
      Location:98 → 241
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    2. NM_001036206.2 → NP_001031283.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031283.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WIZ2, Q9FRK8
      Conserved Domains (2) summary
      smart01100
      Location:21 → 68
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
      cd00170
      Location:98 → 241
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

    3. NM_001036207.2 → NP_001031284.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031284.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9DI59, F4HXG4
      Conserved Domains (1) summary
      cd00170
      Location:15 → 158
      SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
    Nucleotide Protein
    Heading Accession and Version

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