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    CCT motif family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817898, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CCT motif family protein
    Primary source
    TAIR:AT2G33350
    Locus tag
    AT2G33350
    See related
    Araport:AT2G33350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4P9.12; F4P9_12
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (14133810..14137175)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene plasmodesmata-located protein 3 Neighboring gene ncRNA Neighboring gene MOS4-associated complex 3B Neighboring gene cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) Neighboring gene Ribosomal protein L14p/L23e family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001084530.3
    NM_001336448.1
    NM_001336449.1
    NM_128895.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of flower development IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    CCT motif family protein
    NP_001077999.1
    • CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G04500.1); Has 8030 Blast hits to 5339 proteins in 177 species: Archae - 8; Bacteria - 27; Metazoa - 23; Fungi - 136; Plants - 1673; Viruses - 0; Other Eukaryotes - 6163 (source: NCBI BLink).
    NP_180893.2
    • CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT1G04500.1); Has 8037 Blast hits to 5335 proteins in 176 species: Archae - 8; Bacteria - 26; Metazoa - 23; Fungi - 132; Plants - 1672; Viruses - 0; Other Eukaryotes - 6176 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      14133810..14137175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336447.1 → NP_001324045.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSJ1, A0A1P8AZ01
      Conserved Domains (1) summary
      pfam06203
      Location:310 → 331
      CCT; CCT motif

    2. NM_001084530.3 → NP_001077999.1  CCT motif family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077999.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EZU5, Q5BPS2
      Conserved Domains (1) summary
      pfam06203
      Location:310 → 353
      CCT; CCT motif

    3. NM_128895.3 → NP_180893.2  CCT motif family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180893.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654EZU5, Q6E267
      Conserved Domains (1) summary
      pfam06203
      Location:311 → 354
      CCT; CCT motif

    4. NM_001336448.1 → NP_001324047.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQR9, A0A1P8AZ03
      Conserved Domains (1) summary
      pfam06203
      Location:299 → 342
      CCT; CCT motif

    5. NM_001336449.1 → NP_001324046.1  CCT motif family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VQR9, A0A1P8AYU7
    Nucleotide Protein
    Heading Accession and Version

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