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    NOV Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827009, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NOV
    Official Full Name
    Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
    Primary source
    TAIR:AT4G13750
    Locus tag
    AT4G13750
    See related
    Araport:AT4G13750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMB2597; EMBRYO DEFECTIVE 2597; F18A5.140; F18A5_140; NO VEIN
    Summary
    Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.
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    Genomic context

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    See NOV in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    13
    Sequence:
    Chromosome: 4; NC_003075.7 (7975064..7987687)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Inosine triphosphate pyrophosphatase family protein Neighboring gene Ypt/Rab-GAP domain of gyp1p superfamily protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene cytochrome P450, family 83, subfamily A, polypeptide 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. NO VEIN mediates auxin-dependent specification and patterning in the Arabidopsis embryo, shoot, and root. Tsugeki R, et al. Plant Cell, 2009 Oct. PMID 19880797, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_117449.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within auxin polar transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cell fate specification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within leaf vascular tissue pattern formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within root development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stem cell population maintenance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
    NP_193111.2
    • NO VEIN (NOV); FUNCTIONS IN: ATP binding; INVOLVED IN: in 6 processes; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: no vein-like (TAIR:AT1G08300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      7975064..7987687
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117449.4 → NP_193111.2  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193111.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JTS8, Q9SVN7, Q9SVN8
      UniProtKB/TrEMBL
      A0A178V244, A0A654FP03
      Conserved Domains (1) summary
      pfam13020
      Location:2608 → 2698
      DUF3883; Domain of unknown function (DUF3883)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JTS8.1

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