BEH3 BES1/BZR1 homolog 3 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: BEH3
Official Full Name: BES1/BZR1 homolog 3
Primary source: TAIR:AT4G18890
Locus tag: AT4G18890
See related: Araport:AT4G18890
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: BES1/BZR1 homolog 3; F13C5.60; F13C5_60
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Genomic context

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See BEH3 in Genome Data Viewer

Location:: chromosome: 4

Exon count:: 2

Sequence:: Chromosome: 4; NC_003075.7 (10352386..10355555)

Chromosome 4 - NC_003075.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The adaptor protein ECAP, the corepressor LEUNIG, and the transcription factor BEH3 interact and regulate microsporocyte generation in Arabidopsis.
Title: The adaptor protein ECAP, the corepressor LEUNIG, and the transcription factor BEH3 interact and regulate microsporocyte generation in Arabidopsis.
Gene co-expression network analysis identifies BEH3 as a stabilizer of secondary vascular development in Arabidopsis.
Title: Gene co-expression network analysis identifies BEH3 as a stabilizer of secondary vascular development in Arabidopsis.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_118005.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity	IEA Inferred from Electronic Annotation more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in DNA-templated transcription	IEA Inferred from Electronic Annotation more info
involved_in brassinosteroid mediated signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of DNA-templated transcription	TAS Traceable Author Statement more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: BES1/BZR1 homolog 3

NP_193624.1

BES1/BZR1 homolog 3 (BEH3); CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: BES1/BZR1 homolog 4 (TAIR:AT1G78700.1); Has 411 Blast hits to 325 proteins in 33 species: Archae - 0; Bacteria - 8; Metazoa - 41; Fungi - 2; Plants - 260; Viruses - 2; Other Eukaryotes - 98 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003075.7 Reference assembly

Range

10352386..10355555

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001341306.1 → NP_001328106.1 BES1/BZR1 homolog 3 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8B3N3
NM_118005.3 → NP_193624.1 BES1/BZR1 homolog 3 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_193624.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O49404

UniProtKB/TrEMBL

A0A178V1A1, A0A384KGL8, Q2HIR9

Conserved Domains (1) summary

pfam05687
Location:31 → 104

BES1_N; BES1/BZR1 plant transcription factor, N-terminal