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    pesticidal crystal cry8Ba protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828563, updated on 18-Sep-2024

    Summary

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    Official Full Name
    pesticidal crystal cry8Ba protein
    Primary source
    TAIR:AT4G24610
    Locus tag
    AT4G24610
    See related
    Araport:AT4G24610
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22K18.190; F22K18_190
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    21
    Sequence:
    Chromosome: 4; NC_003075.7 (12700317..12708424, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Rho GTPase activation protein (RhoGAP) with PH domain-containing protein Neighboring gene RING finger protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene phosphoglucose isomerase 1 Neighboring gene DHHC-type zinc finger family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203896.1
    NM_001341687.1
    NM_001341688.1
    NM_118594.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    pesticidal crystal cry8Ba protein
    NP_001190825.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1).
    NP_194192.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65440.1); Has 820 Blast hits to 264 proteins in 74 species: Archae - 0; Bacteria - 15; Metazoa - 77; Fungi - 83; Plants - 96; Viruses - 0; Other Eukaryotes - 549 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12700317..12708424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118594.4 → NP_194192.2  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194192.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FSE3, F4JQZ6

    2. NM_001341687.1 → NP_001329819.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8V7, A0A654FSE3

    3. NM_001341688.1 → NP_001329820.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8Y0, A0A5S9XW67, A0A654FSE3

    4. NM_001203896.1 → NP_001190825.1  pesticidal crystal cry8Ba protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190825.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XW67, A0A654FSE3, F4JQZ7
    Nucleotide Protein
    Heading Accession and Version

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