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    BETA-OHASE 1 beta-hydroxylase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828675, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BETA-OHASE 1
    Official Full Name
    beta-hydroxylase 1
    Primary source
    TAIR:AT4G25700
    Locus tag
    AT4G25700
    See related
    Araport:AT4G25700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    B1; BCH1; BETA CAROTENOID HYDROXYLASE 1; beta-hydroxylase 1; chy1
    Summary
    Converts beta-carotene to zeaxanthin via cryptoxanthin.
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    Genomic context

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    See BETA-OHASE 1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (13093869..13096049, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene PPPDE putative thiol peptidase family protein Neighboring gene stress response NST1-like protein Neighboring gene splicing factor 3A subunit Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and functional analysis of the beta-carotene hydroxylase of Arabidopsis thaliana. Sun Z, et al. J Biol Chem, 1996 Oct 4. PMID 8798688
    2. Elucidation of the beta-carotene hydroxylation pathway in Arabidopsis thaliana. Fiore A, et al. FEBS Lett, 2006 Aug 21. PMID 16890225
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_001036638.3
    NM_001341759.1
    NM_118702.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables carotene beta-ring hydroxylase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    enables carotene beta-ring hydroxylase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within carotene metabolic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within xanthophyll biosynthetic process IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    beta-hydroxylase 1
    NP_001320065.1
    • beta-hydroxylase 1 (BETA-OHASE 1); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: beta-carotene hydroxylase 2 (TAIR:AT5G52570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_194300.1
    • beta-hydroxylase 1 (BETA-OHASE 1); FUNCTIONS IN: carotene beta-ring hydroxylase activity; INVOLVED IN: xanthophyll biosynthetic process, carotene metabolic process; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid hydroxylase (InterPro:IPR006694); BEST Arabidopsis thaliana protein match is: beta-carotene hydroxylase 2 (TAIR:AT5G52570.1); Has 865 Blast hits to 862 proteins in 172 species: Archae - 20; Bacteria - 141; Metazoa - 0; Fungi - 0; Plants - 524; Viruses - 0; Other Eukaryotes - 180 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13093869..13096049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118702.4 → NP_194300.1  beta-hydroxylase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194300.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JTC5, Q96297, Q9SZZ8
      UniProtKB/TrEMBL
      A0A5S9XXZ9
      Conserved Domains (1) summary
      PLN02601
      Location:1 → 301
      PLN02601; beta-carotene hydroxylase

    2. NM_001341759.1 → NP_001320065.1  beta-hydroxylase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V372

    3. NM_001036638.3 → NP_001031715.1  beta-hydroxylase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031715.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V372
      Conserved Domains (1) summary
      cl01132
      Location:1 → 215
      FA_hydroxylase; Fatty acid hydroxylase superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SZZ8.1

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