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    RABA2c RAB GTPase homolog A2C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 823836, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RABA2c
    Official Full Name
    RAB GTPase homolog A2C
    Primary source
    TAIR:AT3G46830
    Locus tag
    AT3G46830
    See related
    Araport:AT3G46830
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS RAB GTPASE HOMOLOG A2C; ATRAB-A2C; ATRAB11A; ATRABA2C; RAB GTPase homolog A2C; RAB GTPASE HOMOLOG A2C; RAB-A2C
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    Genomic context

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    See RABA2c in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (17246228..17248823, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene type one serine/threonine protein phosphatase 5 Neighboring gene ncRNA Neighboring gene Subtilase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Rab-A2 and Rab-A3 GTPases define a trans-golgi endosomal membrane domain in Arabidopsis that contributes substantially to the cell plate. Chow CM, et al. Plant Cell, 2008 Jan. PMID 18239134, Free PMC Article
    2. CHARACTERIZATION OF A RABE (RAS GENE FROM RAT BRAIN E) GTPASE EXPRESSED DURING MORPHOGENESIS IN THE UNICELLULAR GREEN ALGA MICRASTERIAS DENTICULATA (ZYGNEMATOPHYCEAE, STREPTOPHYTA)(1). Vannerum K, et al. J Phycol, 2012 Jun. PMID 27011085
    3. Tip Growth Defective1 interacts with the cellulose synthase complex to regulate cellulose synthesis in Arabidopsis thaliana. Lampugnani ER, et al. PLoS One, 2024. PMID 38358988, Free PMC Article
    4. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    5. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001339276.1
    NM_114550.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cell plate IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in endosome IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    RAB GTPase homolog A2C
    NP_190267.1
    • RAB GTPase homolog A2C (RABA2c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: endosome, plasma membrane, cell plate; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A2D (TAIR:AT5G59150.1); Has 28770 Blast hits to 28717 proteins in 774 species: Archae - 26; Bacteria - 141; Metazoa - 14934; Fungi - 4337; Plants - 3364; Viruses - 20; Other Eukaryotes - 5948 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      17246228..17248823 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114550.4 → NP_190267.1  RAB GTPase homolog A2C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190267.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96283
      UniProtKB/TrEMBL
      A0A178V892, A0A5S9XIL3
      Conserved Domains (1) summary
      PLN03110
      Location:1 → 217
      PLN03110; Rab GTPase; Provisional

    2. NM_001339276.1 → NP_001327707.1  RAB GTPase homolog A2C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q96283
      UniProtKB/TrEMBL
      A0A178V892, A0A5S9XIL3
      Conserved Domains (1) summary
      PLN03110
      Location:1 → 217
      PLN03110; Rab GTPase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96283.4

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