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    BCS1 cytochrome BC1 synthesi [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824257, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BCS1
    Official Full Name
    cytochrome BC1 synthesi
    Primary source
    TAIR:AT3G50930
    Locus tag
    AT3G50930
    See related
    Araport:AT3G50930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtBCS1; AtOM66; cytochrome BC1 synthesis; OM66; Outer Mitochondrial membrane protein of 66 kDa
    Summary
    Encodes a protein that is present in a homo-multimeric protein complex on the outer mitochondrial membrane and plays a role in cell death and amplifying salicylic acid signalling.
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    Genomic context

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    See BCS1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_003074.8 (18929526..18932181)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein Neighboring gene Defensin-like (DEFL) family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene HOPZ-ACTIVATED RESISTANCE 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mitochondrial outer membrane AAA ATPase AtOM66 affects cell death and pathogen resistance in Arabidopsis thaliana. Zhang B, et al. Plant J, 2014 Nov. PMID 25227923
    2. Expression of the hypersensitive response-assisting protein in Arabidopsis results in harpin-dependent hypersensitive cell death in response to Erwinia carotovora. Pandey AK, et al. Plant Mol Biol, 2005 Nov. PMID 16270229
    3. Identification of new early markers of the hypersensitive response in Arabidopsis thaliana(1). Lacomme C, et al. FEBS Lett, 1999 Oct 8. PMID 10518009
    4. The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. Navarro L, et al. Plant Physiol, 2004 Jun. PMID 15181213, Free PMC Article
    5. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. A role of At3g50930 in cell death, pathogen resistance and amplifying salicylic acid signalling.
      Title: The mitochondrial outer membrane AAA ATPase AtOM66 affects cell death and pathogen resistance in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_114953.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in plant-type hypersensitive response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within programmed cell death IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to UV IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to molecule of bacterial origin IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within salicylic acid mediated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome BC1 synthesi
    NP_190662.2
    • cytochrome BC1 synthesis (BCS1); FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G50940.1); Has 21434 Blast hits to 19763 proteins in 2733 species: Archae - 1352; Bacteria - 7111; Metazoa - 3538; Fungi - 2773; Plants - 2474; Viruses - 30; Other Eukaryotes - 4156 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18929526..18932181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114953.3 → NP_190662.2  cytochrome BC1 synthesi [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190662.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBK2, Q8VZG2, Q9SVK6
      UniProtKB/TrEMBL
      A0A178V737
      Conserved Domains (3) summary
      smart00382
      Location:299 → 436
      AAA; ATPases associated with a variety of cellular activities
      pfam00004
      Location:302 → 438
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam14363
      Location:83 → 176
      AAA_assoc; Domain associated at C-terminal with AAA
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZG2.1

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