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    SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824330, updated on 18-Sep-2024

    Summary

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    Official Full Name
    SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
    Primary source
    TAIR:AT3G51670
    Locus tag
    AT3G51670
    See related
    Araport:AT3G51670
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (19168672..19171227)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene stress response NST1-like protein Neighboring gene Tautomerase/MIF superfamily protein Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene PIF1 helicase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Patellins 3 and 6, two members of the Plant Patellin family, interact with the movement protein of Alfalfa mosaic virus and interfere with viral movement. Peiro A, et al. Mol Plant Pathol, 2014 Dec. PMID 24751128, Free PMC Article
    2. PATELLINS are regulators of auxin-mediated PIN1 relocation and plant development in Arabidopsis thaliana. Tejos R, et al. J Cell Sci, 2018 Jan 29. PMID 28687624
    3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. the interaction between Alfalfa mosaic virus (AMV) MP and Arabidopsis Patellin 3 (atPATL3) and Patellin 6 (atPATL6), is reported.
      Title: Patellins 3 and 6, two members of the Plant Patellin family, interact with the movement protein of Alfalfa mosaic virus and interfere with viral movement.
    Submit: New GeneRIF Correction

    General gene information

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    NM_115026.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to auxin stimulus IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within protein localization involved in auxin polar transport IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
    NP_190735.1
    • SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), GOLD (InterPro:IPR009038), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein (TAIR:AT4G09160.1); Has 2976 Blast hits to 2970 proteins in 235 species: Archae - 0; Bacteria - 0; Metazoa - 1096; Fungi - 761; Plants - 842; Viruses - 0; Other Eukaryotes - 277 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19168672..19171227
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115026.2 → NP_190735.1  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190735.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SCU1, Q9XFS6
      UniProtKB/TrEMBL
      A0A178VLT0, A0A5S9XJX3
      Conserved Domains (2) summary
      smart00516
      Location:127 → 288
      SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
      pfam03765
      Location:52 → 105
      CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SCU1.1

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