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    SAC3C SAC3/GANP/Nin1/mts3/eIF-3 p25 family [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824604, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SAC3C
    Official Full Name
    SAC3/GANP/Nin1/mts3/eIF-3 p25 family
    Primary source
    TAIR:AT3G54380
    Locus tag
    AT3G54380
    See related
    Araport:AT3G54380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtSAC3C; T14E10.7; yeast Sac3 homolog C
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    Genomic context

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    See SAC3C in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (20133893..20137007, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene sequence-specific DNA binding transcription factor Neighboring gene Eukaryotic aspartyl protease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203157.1
    NM_001339664.1
    NM_180685.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    SAC3/GANP/Nin1/mts3/eIF-3 p25 family
    NP_001190086.1
    • SAC3/GANP/Nin1/mts3/eIF-3 p25 family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1).
    NP_001319745.1
    • SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1); Has 535 Blast hits to 532 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 197; Plants - 95; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
    NP_851016.1
    • SAC3/GANP/Nin1/mts3/eIF-3 p25 family; CONTAINS InterPro DOMAIN/s: SAC3/GANP/Nin1/mts3/eIF-3 p25 (InterPro:IPR005062); BEST Arabidopsis thaliana protein match is: SAC3/GANP/Nin1/mts3/eIF-3 p25 family (TAIR:AT3G06290.1); Has 539 Blast hits to 535 proteins in 177 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 200; Plants - 96; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      20133893..20137007 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180685.3 → NP_851016.1  SAC3/GANP/Nin1/mts3/eIF-3 p25 family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851016.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JCW2, Q67XV2, Q8LAG4, Q94F11, Q9M2U9, Q9M2V0
      UniProtKB/TrEMBL
      A0A654FFR3
      Conserved Domains (1) summary
      cl24019
      Location:126 → 349
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family

    2. NM_001339664.1 → NP_001319745.1  SAC3/GANP/Nin1/mts3/eIF-3 p25 family [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A2H1ZEJ5

    3. NM_001203157.1 → NP_001190086.1  SAC3/GANP/Nin1/mts3/eIF-3 p25 family [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190086.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XKQ7, A0A654FFR3
      Conserved Domains (1) summary
      cl24019
      Location:54 → 277
      CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q67XV2.1

    Gene LinkOut

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