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    phospholipase-like protein (PEARLI 4) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824999, updated on 18-Sep-2024

    Summary

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    Official Full Name
    phospholipase-like protein (PEARLI 4) family protein
    Primary source
    TAIR:AT3G58300
    Locus tag
    AT3G58300
    See related
    Araport:AT3G58300
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (21582764..21583390, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene MATH domain/coiled-coil protein Neighboring gene TRAF-like superfamily protein Neighboring gene cysteine-rich repeat secretory protein, putative (DUF26) Neighboring gene Ubiquitin-specific protease family C19-related protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115692.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phospholipase-like protein (PEARLI 4) family protein
    NP_191389.1
    • Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT3G58330.1); Has 344 Blast hits to 320 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0; Plants - 324; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21582764..21583390 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115692.1 → NP_191389.1  phospholipase-like protein (PEARLI 4) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191389.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VGE3, A0A384KAZ4, A0A7G2ESF2, Q9M2I6
      Conserved Domains (1) summary
      pfam05278
      Location:3 → 149
      PEARLI-4; Arabidopsis phospholipase-like protein (PEARLI 4)
    Nucleotide Protein
    Heading Accession and Version

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