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    HXXXD-type acyl-transferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834846, updated on 18-Sep-2024

    Summary

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    Official Full Name
    HXXXD-type acyl-transferase family protein
    Primary source
    TAIR:AT5G47950
    Locus tag
    AT5G47950
    See related
    Araport:AT5G47950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K16F13.6; K16F13_6
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (19417020..19418657, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Zinc-binding ribosomal protein family protein Neighboring gene 40S ribosomal protein S27 Neighboring gene Aldolase-type TIM barrel family protein Neighboring gene RAB GTPase homolog A4C Neighboring gene HXXXD-type acyl-transferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis BRASSINOSTEROID INACTIVATOR2 is a typical BAHD acyltransferase involved in brassinosteroid homeostasis. Zhang Z, et al. J Exp Bot, 2018 Apr 9. PMID 29462426
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. BIA2 (AT5G47950) is a typical BAHD acyltransferase that is involved in brassinosteroid homeostasis.
      Title: Arabidopsis BRASSINOSTEROID INACTIVATOR2 is a typical BAHD acyltransferase involved in brassinosteroid homeostasis.
    Submit: New GeneRIF Correction

    General gene information

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    NM_124169.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within brassinosteroid homeostasis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HXXXD-type acyl-transferase family protein
    NP_199606.1
    • HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT3G30280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19417020..19418657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124169.3 → NP_199606.1  HXXXD-type acyl-transferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199606.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YD45, Q9FGV4
      Conserved Domains (2) summary
      pfam02458
      Location:4 → 415
      Transferase; Transferase family
      cl23789
      Location:4 → 425
      PLN02481; Omega-hydroxypalmitate O-feruloyl transferase
    Nucleotide Protein
    Heading Accession and Version

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