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    PSK5 phytosulfokine 5 precursor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836716, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PSK5
    Official Full Name
    phytosulfokine 5 precursor
    Primary source
    TAIR:AT5G65870
    Locus tag
    AT5G65870
    See related
    Araport:AT5G65870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPSK5; phytosulfokine 5 precursor
    Summary
    Probable phytosulfokines 5 precursor, coding for a unique plant peptide growth factor.
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    Genomic context

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    See PSK5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (26351373..26352703)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ankyrin repeat family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene ACT domain repeat 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A role for PSK signaling in wounding and microbial interactions in Arabidopsis. Loivamäki M, et al. Physiol Plant, 2010 Aug 1. PMID 20403122
    2. Diversity of Arabidopsis genes encoding precursors for phytosulfokine, a peptide growth factor. Yang H, et al. Plant Physiol, 2001 Nov. PMID 11706167, Free PMC Article
    3. Disruption and overexpression of Arabidopsis phytosulfokine receptor gene affects cellular longevity and potential for growth. Matsubayashi Y, et al. Plant Physiol, 2006 Sep. PMID 16829587, Free PMC Article
    4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_125984.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in cell population proliferation IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within plant organ morphogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    phytosulfokine 5 precursor
    NP_201388.1
    • phytosulfokine 5 precursor (PSK5); FUNCTIONS IN: growth factor activity; INVOLVED IN: cell proliferation, cell differentiation, organ morphogenesis; LOCATED IN: extracellular matrix; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Phytosulfokine (InterPro:IPR009438); BEST Arabidopsis thaliana protein match is: phytosulfokine 4 precursor (TAIR:AT3G49780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26351373..26352703
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125984.4 → NP_201388.1  phytosulfokine 5 precursor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201388.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7PCB7, Q9FEB4
      UniProtKB/TrEMBL
      A0A654GEH1
      Conserved Domains (1) summary
      pfam06404
      Location:13 → 76
      PSK; Phytosulfokine precursor protein (PSK)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FEB4.1

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