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    Zinc-binding dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839174, updated on 18-Sep-2024

    Summary

    Official Full Name
    Zinc-binding dehydrogenase family protein
    Primary source
    TAIR:AT1G26320
    Locus tag
    AT1G26320
    See related
    Araport:AT1G26320
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F28B23.3; F28B23_3
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (9105038..9107231)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene BSD domain-containing protein Neighboring gene uncharacterized protein Neighboring gene K-box region and MADS-box transcription factor family protein Neighboring gene DNA binding protein Neighboring gene cytochrome B5 isoform A

    General gene information

    NM_001198169.1
    NM_102396.3

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    located_in nucleus HDA PubMed 

    General protein information

    Preferred Names
    Zinc-binding dehydrogenase family protein
    NP_001185098.1
    • Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, zinc ion binding, catalytic activity; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1).
    NP_173956.1
    • Zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: alkenal reductase (TAIR:AT5G16970.1); Has 15199 Blast hits to 15179 proteins in 1781 species: Archae - 136; Bacteria - 8413; Metazoa - 848; Fungi - 1033; Plants - 583; Viruses - 0; Other Eukaryotes - 4186 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9105038..9107231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001198169.1NP_001185098.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185098.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ECW1, F4IE59, Q8LA26
      Conserved Domains (2) summary
      cd08295
      Location:9343
      double_bond_reductase_like; Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase
      PLN03154
      Location:5346
      PLN03154; putative allyl alcohol dehydrogenase; Provisional
    2. NM_102396.3NP_173956.1  Zinc-binding dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173956.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654ECW1, Q8LA26, Q9C677
      Conserved Domains (2) summary
      cd08295
      Location:9348
      double_bond_reductase_like; Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase
      PLN03154
      Location:5351
      PLN03154; putative allyl alcohol dehydrogenase; Provisional