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    spindle assembly abnormal protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827141, updated on 18-Sep-2024

    Summary

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    Official Full Name
    spindle assembly abnormal protein
    Primary source
    TAIR:AT4G14840
    Locus tag
    AT4G14840
    See related
    Araport:AT4G14840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3460C; FCAALL.333
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (8511487..8513980, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene hypothetical protein (DUF1677) Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene 17.6 kDa class II heat shock protein Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ovate family protein 11 Neighboring gene secE/sec61-gamma protein transport protein Neighboring gene O-acetylserine (thiol) lyase (OAS-TL) isoform A1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001340973.1
    NM_001340974.1
    NM_117570.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    spindle assembly abnormal protein
    NP_193220.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22520.1); Has 1681 Blast hits to 1532 proteins in 283 species: Archae - 19; Bacteria - 179; Metazoa - 579; Fungi - 131; Plants - 223; Viruses - 5; Other Eukaryotes - 545 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8511487..8513980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117570.4 → NP_193220.1  spindle assembly abnormal protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXX4, O23339
      Conserved Domains (1) summary
      TIGR02169
      Location:394 → 483
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    2. NM_001340973.1 → NP_001329887.1  spindle assembly abnormal protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXX4, O23339

    3. NM_001340974.1 → NP_001329888.1  spindle assembly abnormal protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UXX4, O23339
    Nucleotide Protein
    Heading Accession and Version

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