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    BTB/POZ domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827265, updated on 18-Sep-2024

    Summary

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    Official Full Name
    BTB/POZ domain-containing protein
    Primary source
    TAIR:AT4G15840
    Locus tag
    AT4G15840
    See related
    Araport:AT4G15840
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DL3960W; FCAALL.399
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    12
    Sequence:
    Chromosome: 4; NC_003075.7 (8996834..9001039)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ABC subfamily C protein Neighboring gene ncRNA Neighboring gene ARM repeat superfamily protein Neighboring gene RNA helicase 1 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001341076.1
    NM_117676.8

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein
    NP_193319.6
    • BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), Kelch related (InterPro:IPR013089), BTB/POZ-like (InterPro:IPR000210); Has 3394 Blast hits to 3343 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 3006; Fungi - 79; Plants - 135; Viruses - 80; Other Eukaryotes - 94 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      8996834..9001039
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117676.8 → NP_193319.6  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193319.6

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FPW8, F4JKX0
      Conserved Domains (3) summary
      smart00225
      Location:76 → 175
      BTB; Broad-Complex, Tramtrack and Bric a brac
      smart00875
      Location:181 → 249
      BACK; BTB And C-terminal Kelch
      pfam00651
      Location:71 → 172
      BTB; BTB/POZ domain

    2. NM_001341076.1 → NP_001329172.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B6W9, A0A654FPW8
    Nucleotide Protein
    Heading Accession and Version

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