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    PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818692, updated on 18-Sep-2024

    Summary

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    Official Full Name
    PLAC8 family protein
    Primary source
    TAIR:AT2G40935
    Locus tag
    AT2G40935
    See related
    Araport:AT2G40935
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Sequence:
    Chromosome: 2; NC_003071.7 (17082745..17084376)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene F-box and associated interaction domains-containing protein Neighboring gene ubiquitin-specific protease 5 Neighboring gene ethylene response sensor 1 Neighboring gene Basic-leucine zipper (bZIP) transcription factor family protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001125018.1
    NM_001336877.1
    NM_001336880.1
    NM_001336881.1
    NM_001336882.1
    NM_129657.3
    NM_180008.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PLAC8 family protein
    NP_001118490.1
    • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_001318397.1
    • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 865 Blast hits to 864 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 94; Plants - 626; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
    NP_850339.1
    • PLAC8 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT3G18470.1); Has 562 Blast hits to 561 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 14; Plants - 529; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      17082745..17084376
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001336878.1 → NP_001324509.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWJ5
      Conserved Domains (1) summary
      TIGR01571
      Location:38 → 139
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    2. NM_001336879.1 → NP_001324510.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
      UniProtKB/TrEMBL
      A0A178VUB4, A0A178VW01, A0A5S9X5W6
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 163
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    3. NM_180008.2 → NP_850339.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850339.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWJ5
      Conserved Domains (1) summary
      TIGR01571
      Location:38 → 139
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    4. NM_001336880.1 → NP_001324508.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
      UniProtKB/TrEMBL
      A0A178VUB4, A0A178VW01, A0A5S9X5W6
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 163
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    5. NM_001336877.1 → NP_001318397.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
      UniProtKB/TrEMBL
      A0A178VUB4, A0A178VW01, A0A5S9X5W6
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 163
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    6. NM_001125018.1 → NP_001118490.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001118490.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8S8T8
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 152
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    7. NM_001336881.1 → NP_001324506.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VWJ5
      Conserved Domains (1) summary
      TIGR01571
      Location:38 → 139
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    8. NM_129657.3 → NP_565945.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565945.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
      UniProtKB/TrEMBL
      A0A178VUB4, A0A178VW01, A0A5S9X5W6
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 163
      A_thal_Cys_rich; uncharacterized Cys-rich domain

    9. NM_001336882.1 → NP_001324507.1  PLAC8 family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B3H5K6, Q0WRW9, Q3EBI6, Q8S8T8
      UniProtKB/TrEMBL
      A0A178VUB4, A0A178VW01, A0A5S9X5W6
      Conserved Domains (1) summary
      TIGR01571
      Location:45 → 163
      A_thal_Cys_rich; uncharacterized Cys-rich domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8T8.1

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