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    Slc16a2 solute carrier family 16 (monocarboxylic acid transporters), member 2 [ Mus musculus (house mouse) ]

    Gene ID: 20502, updated on 27-Nov-2024

    Summary

    Official Symbol
    Slc16a2provided by MGI
    Official Full Name
    solute carrier family 16 (monocarboxylic acid transporters), member 2provided by MGI
    Primary source
    MGI:MGI:1203732
    See related
    Ensembl:ENSMUSG00000033965 AllianceGenome:MGI:1203732
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Mct8; Xpct
    Summary
    Enables thyroid hormone transmembrane transporter activity. Involved in thyroid hormone transport. Acts upstream of or within with a negative effect on thyroid hormone generation and thyroid-stimulating hormone secretion. Located in apical plasma membrane. Is expressed in several structures, including alimentary system; cardiovascular system; central nervous system; cochlea; and limb. Used to study Allan-Herndon-Dudley syndrome. Human ortholog(s) of this gene implicated in Allan-Herndon-Dudley syndrome and intellectual disability. Orthologous to human SLC16A2 (solute carrier family 16 member 2). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in kidney adult (RPKM 54.4), liver adult (RPKM 41.5) and 18 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Slc16a2 in Genome Data Viewer
    Location:
    X D; X 46.29 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (102741020..102865594, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (103697414..103821988, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene Ftx transcript, Xist regulator, non-protein coding Neighboring gene STARR-seq mESC enhancer starr_47699 Neighboring gene STARR-positive B cell enhancer ABC_E5733 Neighboring gene predicted gene 9159 Neighboring gene zinc finger, CCHC domain containing 13 Neighboring gene predicted gene 53059 Neighboring gene predicted pseudogene 6222 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene ribosomal protein S2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables amino acid transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables thyroid hormone transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables thyroid hormone transmembrane transporter activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables thyroid hormone transmembrane transporter activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables thyroid hormone transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in amino acid import across plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in amino acid import across plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of amino acid metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in hormone transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in negative regulation of neural precursor cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of negative regulation of neural precursor cell proliferation ISO
    Inferred from Sequence Orthology
    more info
     
    acts_upstream_of_or_within_negative_effect thyroid hormone generation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within_negative_effect thyroid hormone generation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of thyroid hormone metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in thyroid hormone transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in thyroid hormone transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    acts_upstream_of_or_within thyroid hormone transport IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within thyroid hormone transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in thyroid hormone transport ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in thyroid hormone transport ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    acts_upstream_of_or_within_negative_effect thyroid-stimulating hormone secretion IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    acts_upstream_of_or_within_negative_effect thyroid-stimulating hormone secretion IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in transport across blood-brain barrier IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in transport across blood-brain barrier ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in apical plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    monocarboxylate transporter 8
    Names
    MCT 8
    Monocarboxylate transporter 8 (MCT 8) (X-linked PEST-containing transporter)
    X-linked PEST-containing transporter
    solute carrier family 16 member 2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009197.2NP_033223.2  monocarboxylate transporter 8

      See identical proteins and their annotated locations for NP_033223.2

      Status: VALIDATED

      Source sequence(s)
      BC080678, BM935188, CJ177309, CX218841
      Consensus CDS
      CCDS30330.1
      UniProtKB/Swiss-Prot
      O70324, Q8K3S9
      UniProtKB/TrEMBL
      Q05BA2
      Related
      ENSMUSP00000037629.6, ENSMUST00000042664.10
      Conserved Domains (1) summary
      cl26868
      Location:92519
      2A0111; oxalate/formate antiporter family transporter

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      102741020..102865594 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030251272.2XP_030107132.1  monocarboxylate transporter 8 isoform X1

      UniProtKB/TrEMBL
      Q8K3S7
      Conserved Domains (1) summary
      cl28910
      Location:32386
      MFS; Major Facilitator Superfamily