U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    LOC93429 uncharacterized LOC93429 [ Homo sapiens (human) ]

    Gene ID: 93429, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC93429
    Gene description
    uncharacterized LOC93429
    See related
    Ensembl:ENSG00000268460
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in skin (RPKM 3.4), testis (RPKM 2.0) and 4 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See LOC93429 in Genome Data Viewer
    Location:
    19q13.32
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (46210242..46214838)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (49037686..49042282)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (46713499..46718095)

    Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene IGF like family member 2 Neighboring gene uncharacterized LOC105372424 Neighboring gene NANOG hESC enhancer GRCh37_chr19:46673889-46674439 Neighboring gene Sharpr-MPRA regulatory region 10795 Neighboring gene IGFL2 antisense RNA 1 Neighboring gene IGF like family member 1 pseudogene 1 Neighboring gene Sharpr-MPRA regulatory region 8129 Neighboring gene MPRA-validated peak3520 silencer Neighboring gene ribosomal protein L12 pseudogene 41 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr19:46732347-46733546 Neighboring gene IGF like family member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_027003.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC006262
      Related
      ENST00000598170.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

      Range
      46210242..46214838
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060943.1 Alternate T2T-CHM13v2.0

      Range
      49037686..49042282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)