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    ZNF133-AS1 ZNF133 antisense RNA 1 [ Homo sapiens (human) ]

    Gene ID: 105372550, updated on 17-Sep-2024

    Summary

    Official Symbol
    ZNF133-AS1provided by HGNC
    Official Full Name
    ZNF133 antisense RNA 1provided by HGNC
    Primary source
    HGNC:HGNC:40618
    See related
    AllianceGenome:HGNC:40618
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See ZNF133-AS1 in Genome Data Viewer
    Location:
    20p11.23
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (18311361..18359283, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (18362447..18410380, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (18292005..18339927, complement)

    Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904876 Neighboring gene uncharacterized LOC105372551 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17581 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:18268873-18269778 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17583 Neighboring gene zinc finger protein 133 Neighboring gene RN7SK pseudogene 74 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr20:18304193-18304816 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr20:18309992-18311191 Neighboring gene RNY4 pseudogene 11 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC107985418 Neighboring gene long intergenic non-protein coding RNA 851

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_187569.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL049646
    2. NR_187570.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AL049646

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

      Range
      18311361..18359283 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060944.1 Alternate T2T-CHM13v2.0

      Range
      18362447..18410380 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)