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    DPY19L2P4 DPY19L2 pseudogene 4 [ Homo sapiens (human) ]

    Gene ID: 442523, updated on 22-Oct-2024

    Summary

    Official Symbol
    DPY19L2P4provided by HGNC
    Official Full Name
    DPY19L2 pseudogene 4provided by HGNC
    Primary source
    HGNC:HGNC:22176
    See related
    Ensembl:ENSG00000291119 AllianceGenome:HGNC:22176
    Gene type
    pseudo
    RefSeq status
    PROVISIONAL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Biased expression in testis (RPKM 17.5), adrenal (RPKM 2.4) and 6 other tissues See more
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    Genomic context

    See DPY19L2P4 in Genome Data Viewer
    Location:
    7q21.13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (90119400..90125600)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (91369872..91376060)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (89748714..89754914)

    Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986817 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr7:89253154-89254353 Neighboring gene RNA, U6 small nuclear 274, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr7:89516310-89517509 Neighboring gene STEAP2 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr7:89781999-89782539 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26241 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26242 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26243 Neighboring gene NANOG hESC enhancer GRCh37_chr7:89809546-89810047 Neighboring gene STEAP family member 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18357 Neighboring gene ReSE screen-validated silencer GRCh37_chr7:89863874-89864079 Neighboring gene uncharacterized LOC107986819 Neighboring gene STEAP2 metalloreductase

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Phenotypes

    EBI GWAS Catalog

    Description
    A genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl's gyrus.
    EBI GWAS Catalog

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • dpy-19-like 2 pseudogene 4

    Clone Names

    • FLJ25893, MGC39769, MGC48509, DKFZp686L2199

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_003551.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      DQ287934
      Related
      ENST00000693131.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

      Range
      90119400..90125600
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060931.1 Alternate T2T-CHM13v2.0

      Range
      91369872..91376060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)