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    LRRC77P leucine rich repeat containing 77, pseudogene [ Homo sapiens (human) ]

    Gene ID: 646168, updated on 10-Dec-2024

    Summary

    Official Symbol
    LRRC77Pprovided by HGNC
    Official Full Name
    leucine rich repeat containing 77, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:50536
    See related
    Ensembl:ENSG00000293511 AllianceGenome:HGNC:50536
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC01330
    Expression
    Biased expression in testis (RPKM 2.0), heart (RPKM 0.7) and 2 other tissues See more
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    Genomic context

    See LRRC77P in Genome Data Viewer
    Location:
    3q26.1-q26.2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (167895948..167924011)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (170679853..170707917)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (167613736..167641799)

    Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20772 Neighboring gene serpin family I member 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:167533895-167534094 Neighboring gene MEMO1 pseudogene 3 Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene 26 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:167729036-167729547 Neighboring gene golgi integral membrane protein 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20773 Neighboring gene NANOG hESC enhancer GRCh37_chr3:167799674-167800287 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14868

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033843.2 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC026353, AK093355, BC043538, BI828519
    2. NR_145443.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      BC043538, BI828519
      Related
      ENST00000481578.5

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

      Range
      167895948..167924011
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060927.1 Alternate T2T-CHM13v2.0

      Range
      170679853..170707917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)