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    GH9B11 glycosyl hydrolase 9B11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819064, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GH9B11
    Official Full Name
    glycosyl hydrolase 9B11
    Primary source
    TAIR:AT2G44560
    Locus tag
    AT2G44560
    See related
    Araport:AT2G44560
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtGH9B11; F16B22.5; glycosyl hydrolase 9B11
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    Genomic context

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    See GH9B11 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (18391753..18393729, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glycosyl hydrolase 9B9 Neighboring gene glycosyl hydrolase 9B10 Neighboring gene glycosyl hydrolase 9B12 Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130020.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyl hydrolase 9B11
    NP_181984.1
    • glycosyl hydrolase 9B11 (GH9B11); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9B9 (TAIR:AT2G44540.1); Has 1847 Blast hits to 1833 proteins in 271 species: Archae - 2; Bacteria - 688; Metazoa - 179; Fungi - 19; Plants - 915; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18391753..18393729 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130020.3 → NP_181984.1  glycosyl hydrolase 9B11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181984.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O64891, Q8S8Q4
      UniProtKB/TrEMBL
      A0A654F346
      Conserved Domains (2) summary
      PLN00119
      Location:4 → 491
      PLN00119; endoglucanase
      PLN02420
      Location:1 → 488
      PLN02420; endoglucanase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8S8Q4.2

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