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    WRKY43 WRKY DNA-binding protein 43 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819220, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY43
    Official Full Name
    WRKY DNA-binding protein 43
    Primary source
    TAIR:AT2G46130
    Locus tag
    AT2G46130
    See related
    Araport:AT2G46130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATWRKY43; T3F17.22; WRKY DNA-binding protein 43; WRKY DNA-BINDING PROTEIN 43
    Summary
    member of WRKY Transcription Factor; Group II-c
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    Genomic context

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    See WRKY43 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (18957212..18957925)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Nuclear transport factor 2 (NTF2) family protein Neighboring gene ketopantoate hydroxymethyltransferase 1 Neighboring gene tRNA-Glu Neighboring gene Late embryogenesis abundant protein Neighboring gene Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. WRKY43 regulates polyunsaturated fatty acid content and seed germination under unfavourable growth conditions. Geilen K, et al. Sci Rep, 2017 Oct 27. PMID 29079824, Free PMC Article
    2. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665
    3. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
    4. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
    5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_130175.3
    NM_180115.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of DNA-templated transcription ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 43
    NP_182136.2
    • WRKY DNA-binding protein 43 (WRKY43); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3486 Blast hits to 3032 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3471; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
    NP_850446.2
    • WRKY DNA-binding protein 43 (WRKY43); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 24 (TAIR:AT5G41570.1); Has 3313 Blast hits to 2875 proteins in 188 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3301; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      18957212..18957925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130175.3 → NP_182136.2  WRKY DNA-binding protein 43 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182136.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4IH91, O82356, Q8GY11, Q8VWZ0
      UniProtKB/TrEMBL
      A0A5S9X7E8, A0A654F2D2
      Conserved Domains (1) summary
      smart00774
      Location:29 → 86
      WRKY; DNA binding domain

    2. NM_180115.2 → NP_850446.2  WRKY DNA-binding protein 43 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GY11
      Conserved Domains (1) summary
      smart00774
      Location:29 → 82
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GY11.1

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