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    pantothenate kinase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816241, updated on 18-Sep-2024

    Summary

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    Official Full Name
    pantothenate kinase
    Primary source
    TAIR:AT2G17340
    Locus tag
    AT2G17340
    See related
    Araport:AT2G17340
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F5J6.10; F5J6_10
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    12
    Sequence:
    Chromosome: 2; NC_003071.7 (7541313..7544383, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pantothenate kinase Neighboring gene miscRNA Neighboring gene beta-mannosyltransferase-like protein Neighboring gene Ribosomal protein S4 (RPS4A) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The structure at 1.7 A resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana. Bitto E, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2005 Jul 1. PMID 16511115, Free PMC Article
    2. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. X-ray crystallographic structure of teh At2g17340 gene from Arabidopsis thaliana
      Title: The structure at 1.7 A resolution of the protein product of the At2g17340 gene from Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_127289.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pantothenate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in coenzyme A biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in mitochondrion HDA PubMed 

    General protein information

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    Preferred Names
    pantothenate kinase
    NP_565412.1
    • Uncharacterised conserved protein (UCP030210); CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF89 (InterPro:IPR002791), Uncharacterised conserved protein UCP030210 (InterPro:IPR016949); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein (UCP030210) (TAIR:AT4G35360.1); Has 357 Blast hits to 356 proteins in 130 species: Archae - 52; Bacteria - 55; Metazoa - 104; Fungi - 0; Plants - 135; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7541313..7544383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127289.4 → NP_565412.1  pantothenate kinase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565412.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q7XJS9, Q8LCJ8, Q949P3
      UniProtKB/TrEMBL
      A0A654ETK5
      Conserved Domains (1) summary
      pfam01937
      Location:48 → 359
      DUF89; Protein of unknown function DUF89
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q949P3.1

    Gene LinkOut

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