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    CYP86C3 cytochrome P450, family 86, subfamily C, polypeptide 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837871, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CYP86C3
    Official Full Name
    cytochrome P450, family 86, subfamily C, polypeptide 3
    Primary source
    TAIR:AT1G13140
    Locus tag
    AT1G13140
    See related
    Araport:AT1G13140
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ''cytochrome P450; cytochrome P450; F3F19.16; F3F19_16; family 86; polypeptide 3; polypeptide 3''; subfamily C
    Summary
    member of CYP86C
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    Genomic context

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    See CYP86C3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (4478384..4480327, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nucleoporin GLE1-like protein Neighboring gene Cellulase (glycosyl hydrolase family 5) protein Neighboring gene uncharacterized protein Neighboring gene miscRNA Neighboring gene cytochrome P450, family 86, subfamily C, polypeptide 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001198050.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cytochrome P450, family 86, subfamily C, polypeptide 3
    NP_001184979.1
    • ''cytochrome P450, family 86, subfamily C, polypeptide 3'' (CYP86C3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, cauline leaf, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily C, polypeptide 4 (TAIR:AT1G13150.1).
    NP_172773.4
    • ''cytochrome P450, family 86, subfamily C, polypeptide 3'' (CYP86C3); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, cauline leaf, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 86, subfamily C, polypeptide 4 (TAIR:AT1G13150.1); Has 28771 Blast hits to 28679 proteins in 1489 species: Archae - 44; Bacteria - 2446; Metazoa - 10818; Fungi - 6442; Plants - 7961; Viruses - 3; Other Eukaryotes - 1057 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4478384..4480327 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101184.6 → NP_172773.4  cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172773.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5A9, Q500V6, Q9SAE7
      Conserved Domains (1) summary
      cd11064
      Location:80 → 517
      CYP86A; cytochrome P450 family 86, subfamily A

    2. NM_001198050.1 → NP_001184979.1  cytochrome P450, family 86, subfamily C, polypeptide 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001184979.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HP23, Q9SAE7
      Conserved Domains (1) summary
      cl12078
      Location:94 → 499
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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