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    Root hair defective 3 GTP-binding protein (RHD3) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843627, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Root hair defective 3 GTP-binding protein (RHD3)
    Primary source
    TAIR:AT1G72960
    Locus tag
    AT1G72960
    See related
    Araport:AT1G72960
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N23.16; F3N23_16
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    22
    Sequence:
    Chromosome: 1; NC_003070.9 (27446069..27451067)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Toll-Interleukin-Resistance (TIR) domain-containing protein Neighboring gene ncRNA Neighboring gene Disease resistance protein (TIR-NBS class) Neighboring gene Glucose-methanol-choline (GMC) oxidoreductase family protein Neighboring gene LOB domain-containing protein 7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Root hair defective 3 GTP-binding protein (RHD3)
    NP_177439.2
    • Root hair defective 3 GTP-binding protein (RHD3); CONTAINS InterPro DOMAIN/s: Root hair defective 3 GTP-binding (InterPro:IPR008803); BEST Arabidopsis thaliana protein match is: Root hair defective 3 GTP-binding protein (RHD3) (TAIR:AT3G13870.1); Has 479 Blast hits to 469 proteins in 183 species: Archae - 0; Bacteria - 2; Metazoa - 24; Fungi - 185; Plants - 127; Viruses - 0; Other Eukaryotes - 141 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27446069..27451067
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105954.3 → NP_177439.2  Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177439.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SSN0
      UniProtKB/TrEMBL
      A0A178WM92
      Conserved Domains (1) summary
      pfam05879
      Location:48 → 790
      RHD3; Root hair defective 3 GTP-binding protein (RHD3)

    2. NM_001334558.1 → NP_001321991.1  Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WM92, A0A1P8ASL0
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SSN0.2

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