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    thioredoxin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841732, updated on 18-Sep-2024

    Summary

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    Official Full Name
    thioredoxin family protein
    Primary source
    TAIR:AT1G52990
    Locus tag
    AT1G52990
    See related
    Araport:AT1G52990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L10.14; F8L10_14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (19740400..19743449, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene downregulated in DIF1 11 Neighboring gene GTP-binding family protein Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables RNA-DNA hybrid ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    thioredoxin family protein
    NP_564620.1
    • thioredoxin family protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: cell redox homeostasis; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin, core (InterPro:IPR015467), Thioredoxin domain (InterPro:IPR013766), Thioredoxin, conserved site (InterPro:IPR017937), Polynucleotidyl transferase, ribonuclease H fold (InterPro:IPR012337), Thioredoxin-like (InterPro:IPR017936), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Polynucleotidyl transferase, ribonuclease H-like superfamily protein (TAIR:AT5G65005.1); Has 15228 Blast hits to 15210 proteins in 2870 species: Archae - 230; Bacteria - 9375; Metazoa - 871; Fungi - 596; Plants - 1211; Viruses - 5; Other Eukaryotes - 2940 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19740400..19743449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104177.2 → NP_564620.1  thioredoxin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564620.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4HPP4
      Conserved Domains (2) summary
      cd02947
      Location:222 → 310
      TRX_family; TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox ...
      cd06222
      Location:50 → 170
      RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8

    2. NM_001333567.1 → NP_001321111.1  thioredoxin family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQ02
    Nucleotide Protein
    Heading Accession and Version

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