SBT3.5 Subtilase family protein [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: SBT3.5
Official Full Name: Subtilase family protein
Primary source: TAIR:AT1G32940
Locus tag: AT1G32940
See related: Araport:AT1G32940
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: AtSBT3.5; ATSBT3.5; F9L11.11; F9L11_11
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Genomic context

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See SBT3.5 in Genome Data Viewer

Location:: chromosome: 1

Exon count:: 11

Sequence:: Chromosome: 1; NC_003070.9 (11937183..11941116)

Chromosome 1 - NC_003070.9 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

AtPME17 (At2g45220), was highly co-expressed, both spatially and temporally, with AtSBT3.5 (At1g32940) during root development. AtSBT3.5 play a role in the processing of AtPME17 in planta.
Title: Arabidopsis PECTIN METHYLESTERASE17 is co-expressed with and processed by SBT3.5, a subtilisin-like serine protease.

Submit: New GeneRIF Correction

General gene information

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Homology

Orthologs from OrthoDB

NM_001333023.1

Supported by ESTs:

NM_001333024.1

Supported by ESTs:

NM_103027.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables serine-type endopeptidase activity	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in response to fungus	IEP Inferred from Expression Pattern more info	PubMed

Component	Evidence Code	Pubs
located_in apoplast	IDA Inferred from Direct Assay more info
located_in extracellular region	ISM Inferred from Sequence Model more info
located_in plant-type cell wall	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: Subtilase family protein

NP_564412.1

SBT3.5; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: apoplast; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT1G32960.1); Has 6590 Blast hits to 6094 proteins in 1001 species: Archae - 208; Bacteria - 3597; Metazoa - 86; Fungi - 174; Plants - 1956; Viruses - 0; Other Eukaryotes - 569 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003070.9 Reference assembly

Range

11937183..11941116

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001333022.1 → NP_001321957.1 Subtilase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8ASH5, A0A654EK22
NM_103027.3 → NP_564412.1 Subtilase family protein [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_564412.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9MAP7

UniProtKB/TrEMBL

A0A5S9WIM7, A0A654EK22

Conserved Domains (4) summary

cd04852
Location:105 → 586

Peptidases_S8_3; Peptidase S8 family domain, uncharacterized subfamily 3

cd02120
Location:360 → 488

PA_subtilisin_like; Protease-associated domain containing subtilisin-like proteases. This group contains various PA domain-containing subtilisin-like proteases including melon cucumisin, Arabidopsis thaliana Ara12, a nodule specific serine protease from Alnus glutinosa ag12, ...

pfam05922
Location:29 → 108

Inhibitor_I9; Peptidase inhibitor I9

pfam17766
Location:667 → 762

fn3_6; Fibronectin type-III domain
NM_001333023.1 → NP_001321956.1 Subtilase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8ASH6
NM_001333024.1 → NP_001321955.1 Subtilase family protein [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8ASH5, A0A654EK22